News & Publications
Publications
Project 1: Targeting the PD-1 pathway in HCC
Kaseb AO, Hasanov E, Cao HST, Xiao L, Vauthey JN, Lee SS, Yavuz BG, Mohamed YI, Qayyum A, Jindal S, Duan F, Basu S, Yadav SS, Nicholas C, Sun JJ, Singh Raghav KP, Rashid A, Carter K, Chun YS, Tzeng CD, Sakamuri D, Xu L, Sun R, Cristini V, Beretta L, Yao JC, Wolff RA, Allison JP, Sharma P. . Lancet Gastroenterol Hepatol. 2022 Jan 19. doi: 10.1016/S2468-1253(21)00427-1. Epub 2022 Jan 20. PubMed PMID: 35065057; PubMed Central PMCID: PMC8840977.
Mohamed YI, Duda DG, Awiwi MO, Lee SS, Altameemi L, Xiao L, Morris JS, Wolff RA, Elsayes KM, Hatia RI, Qayyum A, Chamseddine SM, Rashid A, Yao JC, Mahvash A, Hassan MM, Amin HM, Kaseb AO. Oncotarget. 2022 Dec 6;13:1314-1321. doi: 10.18632/oncotarget.28322. PubMed PMID: 36473155; PubMed Central PMCID: PMC9726202.
Gok Yavuz B, Datar S, Chamseddine S, Mohamed YI, LaPelusa M, Lee SS, Hu ZI, Koay EJ, Tran Cao HS, Jalal PK, Daniel-MacDougall C, Hassan M, Duda DG, Amin HM, Kaseb AO. Cancers (Basel). 2023 Oct 7;15(19). doi: 10.3390/cancers15194875. Review. PubMed PMID: 37835569; PubMed Central PMCID: PMC10571776.
Chamseddine S, LaPelusa M, Xiao L, Mohamed YI, Lee SS, Hu ZI, Hatia RI, Hassan M, Yao JC, Duda DG, Datar S, Amin HM, Kaseb AO. J Hepatocell Carcinoma. 2024;11:455-461. doi: 10.2147/JHC.S452564. eCollection 2024. PubMed PMID: 38463542; PubMed Central PMCID: PMC10921889.
Dogra P, Shinglot V, Ruiz-Ram¨ªrez J, Cave J, Butner JD, Schiavone C, Duda DG, Kaseb AO, Chung C, Koay EJ, Cristini V, Ozpolat B, Calin GA, Wang Z. Mol Cancer. 2024 Aug 2;23(1):156. doi: 10.1186/s12943-024-02060-5. PubMed PMID: 39095771; PubMed Central PMCID: PMC11295620.
Project 2: Targeting STAT3 with an Oral Small Molecule to Treat Hepatocellular Carcinoma (HCC)
Tweardy DJ. . Trans Am Clin Climatol Assoc. 2022;132:61-76. PMID: 36196170; PMCID: PMC9480546.
Project 3: Non-invasive assessment of liver fibrosis stage and progression in obesity and diabetes: a Hispanic population study
Kwan SY, Jiao J, Joon A, Wei P, Petty LE, Below JE, Daniel CR, Wu X, Zhang J, Jenq RR, Futreal PA, Hawk ET, McCormick JB, Fisher-Hoch SP, Beretta L. . Hepatology. 2021 Oct 11;. doi: 10.1002/hep.32197. [Epub ahead of print] PubMed PMID: 34633706; PMCID: PMC8930512.
Jiao J, Kwan SY, Sabotta CM, Tanaka H, Veillon L, Warmoes MO, Lorenzi PL, Wang Y, Wei P, Hawk ET, Almeda JL, McCormick JB, Fisher-Hoch SP, Beretta L. . Cancer Epidemiol Biomarkers Prev. 2021 Sep;30(9):1643-1651. doi: 10.1158/1055-9965.EPI-21-0183. Epub 2021 Jun 21. PubMed PMID: 34155064; PubMed Central PMCID: PMC8419070.
Heredia NI, Zhang X, Balakrishnan M, Daniel CR, Hwang JP, McNeill LH, Thrift AP. . Prev Med. 2022 Jan;154:106903. doi: 10.1016/j.ypmed.2021.106903. Epub 2021 Dec 1. PubMed PMID: 34861339; PubMed Central PMCID: PMC8724407.
Kwan SY, Sabotta CM, Joon A, Wei P, Petty LE, Below JE, Wu X, Zhang J, Jenq RR, Hawk ET, McCormick JB, Fisher-Hoch SP, Beretta L. mSystems. 2022 Apr 28:e0003322. doi: 10.1128/msystems.00033-22. Epub ahead of print. PMID: 35477306.
Sabotta CM, Kwan SY, Petty LE, Below JE, Joon A, Wei P, Fisher-Hoch SP, McCormick JB, Beretta L. Front Genet. 2022;13:995488. doi: 10.3389/fgene.2022.995488. eCollection 2022. PubMed PMID: 36386790; PubMed Central PMCID: PMC9644071.
Zhang X, Daniel CR, Soltero V, Vargas X, Jain S, Kanwal F, Thrift AP, Balakrishnan M. Am J Gastroenterol. 2024 Mar 1;119(3):505-511. doi: 10.14309/ajg.0000000000002508. Epub 2023 Sep 20. PMID: 37737674; PMCID: PMC11001785.
Kwan S-Y, Sabotta CM, Cruz L, Wong M, Ajami N, McCormick J, Fisher-Hoch S, Beretta L. mSystems. 2024 Sep 17;9(9):e0043424. doi: 10.1128/msystems.00434-24. Epub 2024 Aug 21. PubMed PMID: 39166873; PubMed Central PMCID: PMC11406975.
Kwan S-Y, Gonzales KA, Jamal MA, Stevenson HL, Tan L, Lorenzi PL, Futreal PA, Hawk ET, McCormick JB, Fisher-Hoch SP, Jenq RR, Beretta L. Gut Microbes. 2024 Jan-Dec;16(1):2399260. doi: 10.1080/19490976.2024.2399260. Epub 2024 Sep 6. PubMed PMID: 39239875; PubMed Central PMCID: PMC11382720.
Core 1: Biobank and Pathology
Moussa I, Day RS, Li R, Kaseb A, Jalal PK, Daniel-MacDougall C, Hatia RI, Abdelhakeem A, Rashid A, Chun YS, Li D, Hassan MM. . Cancer Med. 2021 Oct;10(20):7308-7319. doi: 10.1002/cam4.4256. Epub 2021 Sep 18. PubMed PMID: 34535983; PubMed Central PMCID: PMC8525131.
Zheng J, Daniel CR, Hatia RI, Stuff J, Abdelhakeem AA, Rashid A, Chun YS, Jalal PK, Kaseb AO, Li D, Hassan MM. . Hepatology. 2021 Dec;74(6):3161-3173. doi: 10.1002/hep.32046. Epub 2021 Aug 26. PubMed PMID:34233041; PubMed Central PMCID: PMC8639645.
Moussa I, Day RS, Li R, Du XL, Kaseb AO, Jalal PK, Daniel-MacDougall C, Hatia RI, Abdelhakeem A, Rashid A, Chun YS, Li D, Hassan MM. . Nutrients. 2021 Jun 11;13(6). doi: 10.3390/nu13062011. PubMed PMID: 34208122; PubMed Central PMCID: PMC8230753.
Core 2: Biostatistics and Bioinformatics
Wang Z, Wei P. . Bioinformatics. 2021 Apr 1;36(22-23):5439-5447. doi: 10.1093/bioinformatics/btaa1001. PubMed PMID: 33258948; PubMed Central PMCID: PMC8016490.
Wei P. Emerg Top Life Sci. 2021 Dec 21;5(6):829-835. doi: 10.1042/ETLS20210218. Review. PubMed PMID: 34874454; PubMed Central PMCID: PMC8786297.
Wang Z, Lu Y, Fornage M, Jiao L, Shen J, Li D, Wei P. Epigenetics. 2022 Nov;17(11):1357-1372. doi: 10.1080/15592294.2022.2026591. Epub 2022 Jan 14. PubMed PMID: 35030986; PubMed Central PMCID: PMC9586592.
Singh S, Clemente LC, Parra ER, Tchakarov A, Yang C, Li Y, Long JP, Yee C, Lin JS. Oncoimmunology. 2022;11(1):2124678. doi: 10.1080/2162402X.2022.2124678. eCollection 2022. PubMed PMID: 36185804; PubMed Central PMCID: PMC9519023.
Su X, Li Y, M¨¹ller P, Hsu CW, Pan H, Do KA. Pharm Stat. 2022 Nov;21(6):1149-1166. doi: 10.1002/pst.2249. Epub 2022 Jun 24. PubMed PMID: 35748220; PubMed Central PMCID: PMC10134386.
Chi S, Flowers CR, Li Z, Huang X, Wei P. . Ann Appl Stat. 2024 Jun;18(2):1360-1377. doi: 10.1214/23-aoas1838. Epub 2024 Apr 5. PubMed PMID: 39328363; PubMed Central PMCID: PMC11426188.
Career Enhancement Program
Saldarriaga OA, Dye B, Pham J, Wanninger TG, Millian D, Kueht M, Freiberg B, Utay N, Stevenson HL. . Sci Rep. 2021 Jul 15;11(1):14506. doi: 10.1038/s41598-021-93881-7. PubMed PMID: 34267267; PubMed Central PMCID: PMC8282660.
Millian DE, Saldarriaga OA, Wanninger T, Burks JK, Rafati YN, Gosnell J, Stevenson HL. Cancers (Basel). 2022 Apr 7;14(8). doi: 10.3390/cancers14081861. Review. PubMed PMID: 35454766; PubMed Central PMCID: PMC9026790.
Kwan SY, Slayden AN, Coronado AR, Marquez RC, Chen H, Wei P, Savage MI, Vornik LA, Fox JT, Sei S, Liang D, Stevenson HL, Wilkerson GK, Gagea M, Brown PH, Beretta L. Cancer Prev Res (Phila). 2023 Jan 4;16(1):17-28. doi: 10.1158/1940-6207.CAPR-22-0332. PubMed PMID: 36162136; PubMed Central PMCID: PMC9812917.
Wilhelm AB, Cunningham AG, Kassab C, Fitz EC, Dong J, Radhakrishnan RS, Ranganathan S, Tan D, Stevenson HL. Diagn Pathol. 2023 Feb 13;18(1):20. doi: 10.1186/s13000-023-01305-z. PubMed PMID: 36782322; PubMed Central PMCID: PMC9926826.
Zhang Y, Zhao Z, Huang LA, Liu Y, Yao J, Sun C, Li Y, Zhang Z, Ye Y, Yuan F, Nguyen TK, Garlapati NR, Wu A, Egranov SD, Caudle AS, Sahin AA, Lim B, Beretta L, Calin GA, Yu D, Hung MC, Curran MA, Rezvani K, Gan B, Tan Z, Han L, Lin C, Yang L. . 2023 Aug 8;35(8):1457-1473.e13. doi: 10.1016/j.cmet.2023.05.009. Epub 2023 Jun 16. PubMed PMID: 37329887; PubMed Central PMCID: PMC10712687.
Gu L, Zhu Y, Lee M, Nguyen A, Ryujin NT, Huang JY, Pandit SK, Chamseddine S, Xiao L, Mohamed YI, Kaseb AO, Karin M, Shalapour S. . Proc Natl Acad Sci U S A. 2023 May 9;120(19):e2300706120. doi: 10.1073/pnas.2300706120. Epub 2023 May 1. PubMed PMID: 37126700; PubMed Central PMCID: PMC10175751.
Dibra D, Gagea M, Qi Y, Chau GP, Su X, Lozano G. . Cancer Res Commun. 2023 Dec 2;. doi: 10.1158/2767-9764.CRC-23-0218. [Epub ahead of print] PubMed PMID: 38047594; PubMed Central PMCID: PMC10761659.
Tran Cao HS, Witt RG, Elsayes KM, Baiomy AA, Xiao L, Palmquist S, Lee SS, Mohamed YI, Mahvash A, Tzeng CD, Chun YS, Koay EJ, Rashid A, Hassan MM, Yao JC, Vauthey JN, Kaseb AO. Oncologist. 2024 Jun 3;29(6):e803-e810. doi: 10.1093/oncolo/oyad329. PMID: 38159256; PMCID: PMC11144988.
Developmental Research Program
Yim SY, Lee JS. . J Hepatocell Carcinoma. 2021;8:1077-1088. doi: 10.2147/JHC.S270533. eCollection 2021. Review. PubMed PMID: 34522690; PubMed Central PMCID: PMC8434863.
Lee SH, Jeong YS, Lee S, Sohn BH, Hwang HK, Choi GH, Kang CM, Choi JS, Lee WJ, Cheong JH, Jang HJ, Kaseb A, Roberts L, Yim SY, Chun YS, Lee JS. . Cancer Commun (Lond). 2022 Jan 15. doi: 10.1002/cac2.12251. Epub 2022 Jan 15. PMID: 35032367; PMCID: PMC8822477.
Qayyum A, Bhosale P, Aslam R, Avritscher R, Ma J, Pagel MD, Sun J, Mohamed Y, Rashid A, Beretta L, Kaseb AO. . Abdom Radiol (NY). 2021 Mar;46(3):1008-1015. doi: 10.1007/s00261-020-02751-9. Epub 2020 Sep 24. PubMed PMID: 32974761; PubMed Central PMCID: PMC8191337.
Cazoulat G, Anderson BM, McCulloch MM, Rigaud B, Koay EJ, Brock KK. Med Phys. 2021 Oct;48(10):5935-5946. doi: 10.1002/mp.15163. Epub 2021 Aug 25. PubMed PMID: 34390007; PubMed Central PMCID: PMC9132059.
De B, Tran Cao HS, Vauthey JN, Manzar GS, Corrigan KL, Raghav KPS, Lee SS, Tzeng CD, Minsky BD, Smith GL, Holliday EB, Taniguchi CM, Koong AC, Das P, Javle M, Ludmir EB, Koay EJ. Cancer. 2022 Jul 1;128(13):2529-2539. doi: 10.1002/cncr.34223. Epub 2022 Apr 13. PubMed PMID: 35417569; PubMed Central PMCID: PMC9177808.
Fujita M, Chen MM, Siwak DR, Sasagawa S, Oosawa-Tatsuguchi A, Arihiro K, Ono A, Miura R, Maejima K, Aikata H, Ueno M, Hayami S, Yamaue H, Chayama K, Lee JS, Lu Y, Mills GB, Liang H, Nishizuka SS, Nakagawa H. Nat Commun. 2022 Oct 29;13(1):6481. doi: 10.1038/s41467-022-34249-x. PubMed PMID: 36309506; PubMed Central PMCID: PMC9617926.
Lee SH, Yim SY, Jeong YS, Li QX, Kang SH, Sohn BH, Kumar SV, Shin JH, Choi YR, Shim JJ, Kim H, Kim JH, Kim S, Guo S, Johnson RL, Kaseb A, Kang KJ, Chun YS, Jang HJ, Lee BG, Woo HG, Ha MJ, Akbani R, Roberts LR, Wheeler DA, Lee JS. Hepatology. 2022 Dec;76(6):1634-1648. doi: 10.1002/hep.32490. Epub 2022 Jun 29. PubMed PMID: 35349735; PubMed Central PMCID: PMC9519807.
Jung J, Park S, Jang Y, Lee SH, Jeong YS, Yim SY, Lee JS. Cancers (Basel). 2022 Dec 28;15(1). doi: 10.3390/cancers15010186. PubMed PMID: 36612182; PubMed Central PMCID: PMC9818850.
Wang CX, Elganainy D, Zaid MM, Butner JD, Agrawal A, Nizzero S, Minsky BD, Holliday EB, Taniguchi CM, Smith GL, Koong AC, Herman JM, Das P, Maitra A, Wang H, Wolff RA, Katz MHG, Crane CH, Cristini V, Koay EJ. Int J Radiat Oncol Biol Phys. 2022 Sep 1;114(1):163-172. doi: 10.1016/j.ijrobp.2022.04.044. Epub 2022 May 26. PubMed PMID: 35643254; PubMed Central PMCID: PMC10042520.
Engel BJ, Paolillo V, Uddin MN, Gonzales KA, McGinnis KM, Sutton MN, Patnana M, Grindel BJ, Gores GJ, Piwnica-Worms D, Beretta L, Pisaneschi F, Gammon ST, Millward SW. . Cancers (Basel). 2023 Jul 26;15(15). doi: 10.3390/cancers15153787. PubMed PMID: 37568603; PubMed Central PMCID: PMC10417617.
Kim J, Zimmerman MA, Shin WY, Boettcher BT, Lee JS, Park JI, Ali M, Yang M, Mishra J, Hagen CE, McGraw JE, Mathison A, Woehlck HJ, Lomberk G, Camara AKS, Urrutia RA, Stowe DF, Hong JC. . Ann Surg. 2023 Feb 1;277(2):e366-e375. doi: 10.1097/SLA.0000000000005156. Epub 2023 Jan 10. PubMed PMID: 34387201; PubMed Central PMCID: PMC8840998.
Wright T, Wang Y, Stratton SA, Sebastian M, Liu B, Johnson DG, Bedford MT. . Biochem J. 2023 Nov 29;480(22):1805-1816. doi: 10.1042/BCJ20230384. PubMed PMID: 37905668; PubMed Central PMCID: PMC10860161.
Cazoulat G, Gupta AC, Al Taie MM, Koay EJ, Brock KK. Phys Med Biol. 2023 Oct 4;68(20):205009. doi: 10.1088/1361-6560/acfa5f. PMID: 37714187; PMCID: PMC10547850.
Inventions
U.S. Patent Application No. 63/155,155, March 1, 2021.
Entitled: Methods of Detecting Advanced Liver Fibrosis or Hepatocellular Carcinoma Biomarkers in a Sample
Inventor: Laura Beretta
U.S. Patent Application No. 63/424,378, filed November 10, 2022
Entitled: Hepatoprotective probiotic compositions
Inventor: Laura Beretta and Suet Ying Kwan